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Last modified by dionperd on 2024/04/08 12:55
From version 4.1
edited by dionperd
on 2021/05/17 09:54
Change comment: There is no comment for this version
To version 27.1
edited by dionperd
on 2021/05/27 19:27
Change comment: There is no comment for this version

Summary

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2 2  (((
3 3  (% class="container" %)
4 4  (((
5 -= My Collab's Extended Title =
5 += Course on TVB-multiscale cosimulation =
6 6  
7 -My collab's subtitle
7 +McGill University "Summer School in Nonlinear Dynamics for the Life Sciences with Applications to Neuroscience and Psychology" (June 2021)
8 8  )))
9 9  )))
10 10  
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14 14  (((
15 15  = What can I find here? =
16 16  
17 -* Notice how the table of contents on the right
18 -* is automatically updated
19 -* to hold this page's headers
17 +* [[Homework materials>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Homework]] including a use case of a TVB - Spiking Basal Ganglia multiscale cosimulation (see also attached .zip file below)
18 +* [[Homework solutions>>https://drive.ebrains.eu/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/file/HomeworkSolutions.zip]] (see also attached .zip file below; password protected)
20 20  
21 21  = Who has access? =
22 22  
23 -Describe the audience of this collab.
22 +Everybody with an EBRAINS account.
23 +
24 +
25 += Guide to run the use-case notebook =
26 +
27 +1. Run the TVB-NEST app by browsing to [[https:~~/~~/tvb-nest.apps.hbp.eu/>>https://tvb-nest.apps.hbp.eu/||target="_top"]] and logging in with your EBRAINS account.
28 +1. Navigate to "ContributedNotebooks" folder and upload the notebook [[BasalGangliaHomework.ipynb>>https://drive.ebrains.eu/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/file/Homework/BasalGangliaHomework.ipynb]], the data folder [[basal_ganglia_conn>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Homework/basal_ganglia_conn]], and the pictures folder [[pics>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Homework/pics]], found in the [[drive folder "Homework>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Homework]]. All materials can also be found as a .zip file "Homework.zip" attached to this page (scroll down to find it).
29 +1. Navigate inside the Homework folder and run the notebook BasalGangliaHomework.ipynb. Your results will be saved in your personal drive space and can be found in the "ContributedNotebooks" folder whenever you log in again to the app.
24 24  )))
25 25  
26 26  
Homework.zip
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HomeworkSolutions.zip
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