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Last modified by dionperd on 2024/04/08 12:55
From version 40.1
edited by dionperd
on 2021/06/02 16:08
Change comment: There is no comment for this version
To version 24.1
edited by dionperd
on 2021/05/27 19:12
Change comment: Uploaded new attachment "HomeworkSolutions.zip", version 1.1

Summary

Details

Page properties
Title
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1 -TVB-multiscale-cosi-courses-materials
1 +TVB-multiscale-cosim_McGillSummerSchool_06-2021
Content
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2 2  (((
3 3  (% class="container" %)
4 4  (((
5 -= Courses on TVB-multiscale cosimulation =
5 += Course on TVB-multiscale cosimulation =
6 +
7 +McGill University "Summer School in Nonlinear Dynamics for the Life Sciences with Applications to Neuroscience and Psychology" (June 2021)
6 6  )))
7 7  )))
8 8  
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12 12  (((
13 13  = What can I find here? =
14 14  
15 -Materials for TVB-multiscale cosimulation courses for
17 +* Use case of a TVB - Spiking Basal Ganglia cosimulation
18 +* Homework materials
16 16  
17 -* 5th TVB in EBRAINS workshop (June 4th, 2021)
18 -* [[McGill University "Summer School in Nonlinear Dynamics for the Life Sciences with Applications to Neuroscience and Psychology" (June 7th, 2021)>>https://wiki.ebrains.eu/bin/view/Collabs/tvb-multiscale-cosim-mcgillsummerschool/5thTVBinEBRAINSworkshop20210604/]]
19 -
20 20  = Who has access? =
21 21  
22 22  Everybody with an EBRAINS account.
23 23  
24 -
24 +
25 += Guide to run the use-case notebook =
26 +
27 +1. Run the TVB-NEST app by browsing to [[https:~~/~~/tvb-nest.apps.hbp.eu/>>https://tvb-nest.apps.hbp.eu/||target="_top"]] and logging in with your EBRAINS account.
28 +1. Navigate to "ContributedNotebooks" folder and upload the notebook "BasalGangliaHomework.ipynb" and the data folder "basal_ganglia_conn". Both can be found either in the [[drive folder "Lecture">>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Lecture]], or in .zip file "Lecture.zip" attached to this page (scroll down to find it).
29 +1. Now you can run the notebook in the TVB-NEST app. Your results will be saved in your personal drive space and can be found in the "ContributedNotebooks" folder whenever you log in again to the app.
25 25  )))
26 26  
27 27  
HomeworkSolutionsOutputs.zip
Author
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1 -XWiki.dionperd
Size
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1 -23.2 MB
Content
Collaboratory.Apps.Collab.Code.CollabClass[0]
Description
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1 -This Collab will support the courses on TVB multiscale cosimulation with homeworks' and hands-on sessions' materials
1 +This Collab will support the course on TVB multiscale cosimulation given in the McGill University "Summer School in Nonlinear Dynamics for the Life Sciences with Applications to Neuroscience and Psychology" (31/5-6/6, 2021).
2 +
3 +For the moment, students can find the materials (notebook with extended documentation comments, and necessary data) for a TVB - Spiking Basal Ganglia cosimulation use-case, and for the homework. More information is going to follow as we get closer to the summer school.