Attention: The Collaboratory IAM will down for up to 1 hour on Monday, the 7th of July 2025 starting from 5pm CEST (my timezone) for up to 1 hour. Any and all services, which require a user login with an EBRAINS account, will be un-available during that time


Version 26.1 by dionperd on 2021/05/27 19:23

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dionperd 8.1 5 = Course on TVB-multiscale cosimulation =
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dionperd 9.1 7 McGill University "Summer School in Nonlinear Dynamics for the Life Sciences with Applications to Neuroscience and Psychology" (June 2021)
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15 = What can I find here? =
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dionperd 26.1 17 * [[Homework materials>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Homework]] including a use case of a TVB - Spiking Basal Ganglia multiscale cosimulation (see also attached .zip file below)
18 * [[Homework solutions>>https://drive.ebrains.eu/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/file/HomeworkSolutions.zip]] (see also attached .zip file below; password protected)
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20 = Who has access? =
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dionperd 7.1 22 Everybody with an EBRAINS account.
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25 = Guide to run the use-case notebook =
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dionperd 13.1 27 1. Run the TVB-NEST app by browsing to [[https:~~/~~/tvb-nest.apps.hbp.eu/>>https://tvb-nest.apps.hbp.eu/||target="_top"]] and logging in with your EBRAINS account.
dionperd 26.1 28 1. Navigate to "ContributedNotebooks" folder and upload the [[drive folder "Homework>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Homework]]. It can also be found as a .zip file "Homework.zip" attached to this page (scroll down to find it).
29 1. Browse inside the Homework folder and run the notebook "BasalGangliaHomework.ipynb". Your results will be saved in your personal drive space and can be found in the "ContributedNotebooks" folder whenever you log in again to the app.
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35 {{box title="**Contents**"}}
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