Wiki source code of EBRAINS_CodeJam2022
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23.1 | 3 | (% class="box" style="text-align: center;" %) |
| 4 | ((( | ||
| 5 | **HBP/EBRAINS CodeJam2022** | ||
| 6 | ))) | ||
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16.1 | 8 | (% style="text-align: center;" %) |
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24.1 | 9 | === **TVB-Multiscale: Deep Brain Stimulation use case demonstration & TVB-NETPYNE demonstration** === |
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16.1 | 11 | November 24th, 2022 |
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| 15 | === What can I find here? === | ||
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22.1 | 17 | * Presentation slides for the [[TVB-Multiscale and for DBS demonstration with TVB-ANNarchy>>attach:2022-11-24_TVB-multiscale_CodeJam2022.pdf]]. |
| 18 | * Presentation slides for the [[TVB-NETPYNE demonstration>>attach:Ebrains_TVB-NetPyNE_slides.pdf]]. | ||
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2.1 | 19 | |
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15.1 | 20 | === Guide to run the use-case notebooks === |
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| 22 | 1. Run the EBRAINS TVB-Multiscale app by browsing to [[https:~~/~~/tvb-multiscale.apps.hbp.eu/>>url:https://tvb-multiscale.apps.hbp.eu/]] and logging in with your EBRAINS account. (The first time you log-in, you might need to try several times by refreshing the page, until it works for you!) | ||
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22.1 | 23 | 1. Navigate to "TVB-Multiscale-Examples/notebooks" folder, and copy its contents to the "Contributed-Notebooks" folder, which offers user-specific persistent storage. |
| 24 | 1. Run the TVB-ANNarchy_DBS_BasalGanglia.ipynb notebook for TVB-ANNarchy DBS Co-Simulation and TVB-NETPYNE_RedWongWang.ipynb for the TVB-NETPYNE Co-Simulation |