Last modified by dionperd on 2024/04/08 12:55
From version 4.1
edited by dionperd
on 2022/11/08 15:56
Change comment: Uploaded new attachment "SimulateWithEBRAINS.zip", version 1.1
To version 6.1
edited by dionperd
on 2022/11/08 15:57
Change comment: Uploaded new attachment "SimulateWithEBRAINS.jpg", version {1}

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11 11  === What can I find here? ===
12 12  
13 13  * Presentation slides from the workshop's lecture.
14 -* The notebook ([[SimulateWithEBRAINS.zip>>path:/bin/download/Collabs/tvb-multiscale-cosim-mcgillsummerschool/Simulate%20with%20EBRAINS%20TVB-multiscale%20workshop%20presentation/TheVirtual%20BrainInClinicalResearchAugust2022/WebHome/SimulateWithEBRAINS.zip?rev=1.1]]) demonstrated during the workshop.
14 +* The notebook ([[SimulateWithEBRAINS.zip>>path:https://wiki.ebrains.eu/bin/download/Collabs/tvb-multiscale-cosim-mcgillsummerschool/Simulate%20with%20EBRAINS%20TVB-multiscale%20workshop%20presentation/WebHome/SimulateWithEBRAINS.zip?rev=1.1]]) demonstrated during the workshop.
15 15  
16 16  === Guide to run the use-case notebook ===
17 17  
18 18  1. Run the EBRAINS TVB-Multiscale app by browsing to [[https:~~/~~/tvb-multiscale.apps.hbp.eu/>>url:https://tvb-multiscale.apps.hbp.eu/]] and logging in with your EBRAINS account. (The first time you log-in, you might need to try several times by refreshing the page, until it works for you!)
19 19  1. Navigate to "Contributed-Notebooks" folder, which offers user-specific persistent storage.
20 -1. Upload and unzip there [[SimulateWithEBRAINS.zip>>path:/bin/download/Collabs/tvb-multiscale-cosim-mcgillsummerschool/Simulate%20with%20EBRAINS%20TVB-multiscale%20workshop%20presentation/TheVirtual%20BrainInClinicalResearchAugust2022/WebHome/SimulateWithEBRAINS.zip?rev=1.1]] by starting a terminal session or a new notebook and running unzip SimulateWithEBRAINS.zip
20 +1. Upload and unzip there [[SimulateWithEBRAINS.zip>>path:https://wiki.ebrains.eu/bin/download/Collabs/tvb-multiscale-cosim-mcgillsummerschool/Simulate%20with%20EBRAINS%20TVB-multiscale%20workshop%20presentation/WebHome/SimulateWithEBRAINS.zip?rev=1.1]] by starting a terminal session or a new notebook and running unzip SimulateWithEBRAINS.zip
21 21  1. Run the TVB-corr-cortex-opt.ipynb notebook for TVB-ANNarchy cosimulation and the ANNarchy-spiking-cortex.ipynb one for ANNarchy only simulation.
SimulateWithEBRAINS.jpg
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