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Last modified by dionperd on 2024/04/08 12:54
From version 1.1
edited by dionperd
on 2022/08/05 12:19
Change comment: There is no comment for this version
To version 22.1
edited by dionperd
on 2022/11/08 15:44
Change comment: Deleted image "SimulateWithEBRAINS.jpg"

Summary

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Title
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1 -TheVirtual BrainInClinicalResearchAugust2022
1 +Simulate with EBRAINS TVB-multiscale workshop presentation (November 2022)
Content
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1 -(% class="wikigeneratedid" %)
2 -== [[image:https://www.brainsimulation.org/bsw/img/9687/text_illustration_maxi@2x||alt="Virtual Course Series Summer 2022 Banner"]] ==
1 +== [[image:SimulateWithEBRAINS.jpg]] ==
3 3  
3 +
4 +(% class="wikigeneratedid" id="HTheVirtualBraininClinicalResearch:AnIntroduction.Charite2CA0June28th2C2022toSeptember13th2C2022" %)
5 +**TVB-Multiscale: Deep Brain Stimulation use case demonstration**
6 +
4 4  (% class="wikigeneratedid" %)
5 -== **The Virtual Brain in Clinical Research: An Introduction**. Charite, June 28th, 2022 to September 13th, 2022 ==
8 +November 9th, 2022
6 6  
10 +
11 +
12 +=== What can I find here? ===
13 +
14 +* Presentation slides from the workshop's lecture.
15 +* The notebook demonstrated during the workshop.
16 +
17 +=== Guide to run the use-case notebook ===
18 +
19 +1. Run the EBRAINS TVB-Multiscale app by browsing to [[https:~~/~~/tvb-multiscale.apps.hbp.eu/>>https://tvb-multiscale.apps.hbp.eu/]] and logging in with your EBRAINS account. (The first time you log-in, you might need to try several times by refreshing the page, until it works for you!)
20 +1. Navigate to "Contributed-Notebooks" folder, which offers user-specific persistent storage.
21 +1. Unzip there SimulateWithEBRAINS.zip by starting a terminal session or a new notebook and running unzip SimulateWithEBRAINS.zip
22 +1. Run the TVB-corr-cortex-opt.ipynb notebook for TVB-ANNarchy cosimulation and the ANNarchy-spiking-cortex.ipynb one for ANNarchy only simulation..
23 +
7 7  == ==