Last modified by dionperd on 2024/04/08 12:54
From version 26.1
edited by dionperd
on 2022/11/08 15:47
Change comment: There is no comment for this version
To version 21.1
edited by dionperd
on 2022/11/08 15:44
Change comment: Deleted attachment "2022-08-09_TVB-multiscale_SummerVirtualCourse.pdf"

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1 -(% class="wikigeneratedid" %)
2 2  == [[image:SimulateWithEBRAINS.jpg]] ==
3 3  
4 4  
5 -== **TVB-Multiscale: Deep Brain Stimulation use case demonstration** ==
4 +(% class="wikigeneratedid" id="HTheVirtualBraininClinicalResearch:AnIntroduction.Charite2CA0June28th2C2022toSeptember13th2C2022" %)
5 +**TVB-Multiscale: Deep Brain Stimulation use case demonstration**
6 6  
7 7  (% class="wikigeneratedid" %)
8 8  November 9th, 2022
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12 12  === What can I find here? ===
13 13  
14 14  * Presentation slides from the workshop's lecture.
15 -* The notebook ([[SimulateWithEBRAINS.zip>>attach:SimulateWithEBRAINS.zip]]) demonstrated during the workshop.
15 +* The notebook demonstrated during the workshop.
16 16  
17 17  === Guide to run the use-case notebook ===
18 18  
19 19  1. Run the EBRAINS TVB-Multiscale app by browsing to [[https:~~/~~/tvb-multiscale.apps.hbp.eu/>>https://tvb-multiscale.apps.hbp.eu/]] and logging in with your EBRAINS account. (The first time you log-in, you might need to try several times by refreshing the page, until it works for you!)
20 20  1. Navigate to "Contributed-Notebooks" folder, which offers user-specific persistent storage.
21 -1. Upload and unzip there [[SimulateWithEBRAINS.zip>>attach:SimulateWithEBRAINS.zip]] by starting a terminal session or a new notebook and running unzip SimulateWithEBRAINS.zip
22 -1. Run the TVB-corr-cortex-opt.ipynb notebook for TVB-ANNarchy cosimulation and the ANNarchy-spiking-cortex.ipynb one for ANNarchy only simulation.
21 +1. Unzip there SimulateWithEBRAINS.zip by starting a terminal session or a new notebook and running unzip SimulateWithEBRAINS.zip
22 +1. Run the TVB-corr-cortex-opt.ipynb notebook for TVB-ANNarchy cosimulation and the ANNarchy-spiking-cortex.ipynb one for ANNarchy only simulation..
23 23  
24 24  == ==
SimulateWithEBRAINS.zip
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1 -XWiki.dionperd
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