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Summary

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1 -The Virtual Brain In Clinical Research August 2022
1 +TheVirtual BrainInClinicalResearchAugust2022
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1 -== [[image:SimulateWithEBRAINS.jpg]] ==
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2 +== [[image:https://www.brainsimulation.org/bsw/img/9687/text_illustration_maxi@2x||alt="Virtual Course Series Summer 2022 Banner"]] ==
2 2  
3 -
4 -== **TVB-Multiscale: Deep Brain Stimulation use case demonstration** ==
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6 6  (% class="wikigeneratedid" %)
7 -November 9th, 2022
5 +== **The Virtual Brain in Clinical Research: An Introduction**. Charite, June 28th, 2022 to September 13th, 2022 ==
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9 -
10 -
11 -=== What can I find here? ===
12 -
13 -* Presentation slides from the workshop's lecture.
14 -* The notebook ([[SimulateWithEBRAINS.zip>>attach:SimulateWithEBRAINS.zip]]) demonstrated during the workshop.
15 -
16 -=== Guide to run the use-case notebook ===
17 -
18 -1. Run the EBRAINS TVB-Multiscale app by browsing to [[https:~~/~~/tvb-multiscale.apps.hbp.eu/>>https://tvb-multiscale.apps.hbp.eu/]] and logging in with your EBRAINS account. (The first time you log-in, you might need to try several times by refreshing the page, until it works for you!)
19 -1. Navigate to "Contributed-Notebooks" folder, which offers user-specific persistent storage.
20 -1. Upload and unzip there [[SimulateWithEBRAINS.zip>>attach:SimulateWithEBRAINS.zip]] by starting a terminal session or a new notebook and running unzip SimulateWithEBRAINS.zip
21 -1. Run the TVB-corr-cortex-opt.ipynb notebook for TVB-ANNarchy cosimulation and the ANNarchy-spiking-cortex.ipynb one for ANNarchy only simulation.
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23 23  == ==