Changes for page TVB Widgets
Last modified by ldomide on 2023/05/17 17:25
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Page properties (1 modified, 0 added, 0 removed)
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... ... @@ -4,7 +4,7 @@ 4 4 ((( 5 5 = TVB inspired GUI Widgets = 6 6 7 -// from[[https:~~/~~/github.com/the-virtual-brain/tvb-widgets>>https://github.com/the-virtual-brain/tvb-widgets]] , //[[https:~~/~~/github.com/the-virtual-brain/tvb-ext-bucket>>https://github.com/the-virtual-brain/tvb-ext-bucket]],// //[[https:~~/~~/github.com/the-virtual-brain/tvb-ext-xircuits>>https://github.com/the-virtual-brain/tvb-ext-xircuits]]//and [[https:~~/~~/github.com/the-virtual-brain/tvb-ext-unicore>>https://github.com/the-virtual-brain/tvb-ext-unicore]]//7 +//code in [[https:~~/~~/github.com/the-virtual-brain/tvb-widgets>>https://github.com/the-virtual-brain/tvb-widgets]] , //[[https:~~/~~/github.com/the-virtual-brain/tvb-ext-bucket>>https://github.com/the-virtual-brain/tvb-ext-bucket]],// //[[https:~~/~~/github.com/the-virtual-brain/tvb-ext-xircuits>>https://github.com/the-virtual-brain/tvb-ext-xircuits]]//and [[https:~~/~~/github.com/the-virtual-brain/tvb-ext-unicore>>https://github.com/the-virtual-brain/tvb-ext-unicore]]// 8 8 9 9 **for EBRAINS showcases** 10 10 ))) ... ... @@ -18,13 +18,13 @@ 18 18 19 19 * Description of TVB GUI Widgets 20 20 * Installation and usage guidance 21 -* Basic examples 21 +* Basic usage examples 22 22 23 23 === Authors === 24 24 25 -* (% style="color:#595959; font-family:Arial; font-size:14pt; font-style:normal; font-variant:normal; font-weight:400; text-decoration:none; white-space:pre-wrap" %)**SDL Neuroscience Juelich**: Sandra Diaz 26 -* (% style="color:#595959; font-family:Arial; font-size:14pt; font-style:normal; font-variant:normal; font-weight:400; text-decoration:none; white-space:pre-wrap" %)**INS Marseille**: Jan Fousek 27 -* (% style="color:#595959; font-family:Arial; font-size:14pt; font-style:normal; font-variant:normal; font-weight:400; text-decoration:none; white-space:pre-wrap" %)**Codemart**: Paula Prodan, David Bacter, Romina Baila, Jochen Mersmann, Lia Domide 25 +* (% style="color:#595959; font-family:Arial; font-size:14pt; font-style:normal; font-variant:normal; font-weight:400; text-decoration:none; white-space:pre-wrap" %)**SDL Neuroscience Juelich**: Sandra Diaz (lead) 26 +* (% style="color:#595959; font-family:Arial; font-size:14pt; font-style:normal; font-variant:normal; font-weight:400; text-decoration:none; white-space:pre-wrap" %)**INS Marseille**: Jan Fousek (PO) 27 +* [[(% style="color:#595959; font-family:Arial; font-size:14pt; font-style:normal; font-variant:normal; font-weight:400; text-decoration:none; white-space:pre-wrap" %)**Codemart**>>https://www.codemart.ro/codemart/zwei/||rel="noopener noreferrer" target="_blank"]](%%): Paula Prodan, David Bacter, Romina Baila, Teodora Misan, Rares Horge, Jochen Mersmann, Lia Domide (technical team) 28 28 29 29 === Concepts === 30 30 ... ... @@ -39,26 +39,21 @@ 39 39 == (% style="line-height:150%" %)**MOTIVATION**(%%) == 40 40 41 41 (% class="western" lang="en-AU" style="border:none; padding:0in" %) 42 -(% style="line-height:150%" %)The showcases developed in the last phase of the HBP are meant to illustrate the full potential of technical and scientific features offered by EBRAINS. In order to support the usability of the showcases, as well as future EBRAINS workflows, we have developed a set of modular graphic components and software solutions [1]which can be easily deployed or replicated in the EBRAINS Collaboratory within the JupyterLab.42 +(% style="line-height:150%" %)The showcases developed in the last phase of the HBP are meant to illustrate the full potential of technical and scientific features offered by EBRAINS. In order to support the usability of the showcases, as well as future EBRAINS workflows, we have developed a set of modular graphic components and software solutions, which can be easily deployed or replicated in the EBRAINS Collaboratory within the [[JupyterLab>>https://lab.ebrains.eu/||rel="noopener noreferrer" target="_blank"]]. 43 43 44 44 (% class="western" lang="en-AU" style="border:none; padding:0in" %) 45 45 (% style="line-height:150%" %)These graphical user interfaces (GUI) components are all based on and under open source licences, supporting open neuroscience and they enable features like: 46 46 47 -(% class="western" lang="en-AU" style="border:none; padding:0in" %) 48 -(% style="line-height:150%" %)• Easy setup of models and region specific or cohort simulations 47 +* (% style="line-height:150%" %)Easy setup of models and region specific or cohort simulations 48 +* (% style="line-height:150%" %)Selection of Data sources and their links to models. 49 +* (% style="line-height:150%" %)Querying data from [[Siibra>>https://siibra-python.readthedocs.io/en/latest/||rel="noopener noreferrer" target="_blank"]] and the Knowledge Graph. 50 +* (% style="line-height:150%" %)Deployment and monitoring jobs on HPC resources. 51 +* (% style="line-height:150%" %)Integration of a subset of [[the virtual brain>>https://www.thevirtualbrain.org/tvb/zwei||rel="noopener noreferrer" target="_blank"]] analysis and visualisation tools. 49 49 50 -(% class="western" lang="en-AU" style="border:none; padding:0in" %) 51 -(% style="line-height:150%" %)• Selection of Data sources and their links to models. 53 +{{html}} 54 +<iframe width="800" height="400" src="https://www.youtube.com/embed/NXtyiQZIdBE" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe> 55 +{{/html}} 52 52 53 -(% class="western" lang="en-AU" style="border:none; padding:0in" %) 54 -(% style="line-height:150%" %)• Querying data from Siibra and the Knowledge Graph. 55 - 56 -(% class="western" lang="en-AU" style="border:none; padding:0in" %) 57 -(% style="line-height:150%" %)• Deployment and monitoring jobs on HPC resources. 58 - 59 -(% class="western" lang="en-AU" style="border:none; padding:0in" %) 60 -(% style="line-height:150%" %)• Integration of a subset of the virtual brain [2] analysis and visualisation tools [3]. 61 - 62 62 (% class="western" id="HMETHODS" lang="en-AU" style="border: none; padding: 0in;" %) 63 63 == METHODS == 64 64