Last modified by paulapopa on 2023/03/24 08:17
From version 26.1
edited by rominabaila
on 2022/11/25 16:03
Change comment: There is no comment for this version
To version 25.1
edited by rominabaila
on 2022/11/16 15:25
Change comment: There is no comment for this version

Summary

Details

Page properties
Content
... ... @@ -86,38 +86,10 @@
86 86  
87 87  == Workflow examples ==
88 88  
89 -(((
90 -=== 1. Full TVB Simulation workflow ===
91 -)))
89 +=== A TVB simulation workflow ===
92 92  
93 -Contains all TVB components necessary for running a TVB simulation (i.e. connectivity, coupling, model, integrator, monitor, simulator).
91 +(% style="text-align:center" %)
92 +[[image:image-20221116162514-1.png||height="800" width="1456"]]
94 94  
95 -{{html}}
96 -<iframe src="https://drive.google.com/file/d/14sVjWXmtfZB-Zt7i3MA26-MiNWwv3jZI/preview" width="1920" height="1080" allow="autoplay"></iframe>
97 -{{/html}}
98 -
99 -
100 -=== 2. Configuring model parameters using the PhasePlaneWidget: ===
101 -
102 -Same workflow as before, but the parameter for the model used in simulation are set using the PhasePlaneWidget.
103 -
104 -{{html}}
105 -<iframe src="https://drive.google.com/file/d/1Puoi4-Ej4BhVwtdRzciPD_qNKMF0HvGT/preview" width="1920" height="1080" allow="autoplay"></iframe>
106 -{{/html}}
107 -
108 -
109 -=== 3. Using siibra to retrieve connectivities from the EBRAINS KG ===
110 -
111 -A simulation workflow where **siibra **is used to retrieve a connectivity from the EBRAINS KG. That connectivity is fed into a TVB Simulator, where the rest of the parameters (coupling, model, etc.) are set to default values.
112 -
113 -{{html}}
114 -<iframe src="https://drive.google.com/file/d/1bakH6ZD96eMHnYSw1aasF_gNXt8sBS7D/preview" width="1920" height="1080" allow="autoplay"></iframe>
115 -{{/html}}
116 -
117 -
118 -=== 4. Run a workflow inside an HPB job ===
119 -
120 -A workflow simulation which is run remotely, by submitting a job to an HPC site and getting back the results (TimeSeries object).
121 -
122 -{{html}}<iframe src="https://drive.google.com/file/d/1rvcj_9lGtR069iXlL3Rm1czMNdA3qmGM/preview" width="1920" height="1080" allow="autoplay"></iframe>{{/html}}
94 +{{html}}<iframe src="https://drive.google.com/file/d/1wZ1EWSPUAI2NgGzrQiUZHL-kLEydZ4RC/preview" width="840" height="480" allow="autoplay"></iframe>{{/html}}
123 123  
Public

TVB Widgets