Last modified by paulapopa on 2023/03/24 08:17
From version 32.1
edited by paulapopa
on 2023/03/08 15:23
Change comment: Uploaded new attachment "newxircuits.png", version {1}
To version 26.1
edited by rominabaila
on 2022/11/25 16:03
Change comment: There is no comment for this version

Summary

Details

Page properties
Author
... ... @@ -1,1 +1,1 @@
1 -XWiki.paulapopa
1 +XWiki.rominabaila
Content
... ... @@ -1,7 +1,5 @@
1 1  Source code: [[https:~~/~~/github.com/the-virtual-brain/tvb-ext-xircuits>>https://github.com/the-virtual-brain/tvb-ext-xircuits]]
2 2  
3 -Release on Pypi: [[https:~~/~~/pypi.org/project/tvb-ext-xircuits/>>https://pypi.org/project/tvb-ext-xircuits/]]
4 -
5 5  == Jupyter Lab Extension for building and executing EBRAINS Workflows ==
6 6  
7 7  == Purpose ==
... ... @@ -26,9 +26,8 @@
26 26  
27 27  After installing the extension and opening a Jupyter Lab session, you should be able to see in the left panel of Jupyter Lab a new icon, which represents the Xircuits components tray:
28 28  
29 -[[image:side.png]]
27 +[[image:image-20221116115659-2.png]]
30 30  
31 -
32 32  == **Usage** ==
33 33  
34 34  === **Step 1. Create a new Xircuits workflow** ===
... ... @@ -96,7 +96,7 @@
96 96  Contains all TVB components necessary for running a TVB simulation (i.e. connectivity, coupling, model, integrator, monitor, simulator).
97 97  
98 98  {{html}}
99 -<iframe src="https://drive.google.com/file/d/14sVjWXmtfZB-Zt7i3MA26-MiNWwv3jZI/preview" width="1280" height="720" allow="autoplay"></iframe>
96 +<iframe src="https://drive.google.com/file/d/14sVjWXmtfZB-Zt7i3MA26-MiNWwv3jZI/preview" width="1920" height="1080" allow="autoplay"></iframe>
100 100  {{/html}}
101 101  
102 102  
... ... @@ -105,7 +105,7 @@
105 105  Same workflow as before, but the parameter for the model used in simulation are set using the PhasePlaneWidget.
106 106  
107 107  {{html}}
108 -<iframe src="https://drive.google.com/file/d/1Puoi4-Ej4BhVwtdRzciPD_qNKMF0HvGT/preview" width="1280" height="720" allow="autoplay"></iframe>
105 +<iframe src="https://drive.google.com/file/d/1Puoi4-Ej4BhVwtdRzciPD_qNKMF0HvGT/preview" width="1920" height="1080" allow="autoplay"></iframe>
109 109  {{/html}}
110 110  
111 111  
... ... @@ -114,7 +114,7 @@
114 114  A simulation workflow where **siibra **is used to retrieve a connectivity from the EBRAINS KG. That connectivity is fed into a TVB Simulator, where the rest of the parameters (coupling, model, etc.) are set to default values.
115 115  
116 116  {{html}}
117 -<iframe src="https://drive.google.com/file/d/1bakH6ZD96eMHnYSw1aasF_gNXt8sBS7D/preview" width="1280" height="720" allow="autoplay"></iframe>
114 +<iframe src="https://drive.google.com/file/d/1bakH6ZD96eMHnYSw1aasF_gNXt8sBS7D/preview" width="1920" height="1080" allow="autoplay"></iframe>
118 118  {{/html}}
119 119  
120 120  
... ... @@ -122,5 +122,5 @@
122 122  
123 123  A workflow simulation which is run remotely, by submitting a job to an HPC site and getting back the results (TimeSeries object).
124 124  
125 -{{html}}<iframe src="https://drive.google.com/file/d/1rvcj_9lGtR069iXlL3Rm1czMNdA3qmGM/preview" width="1280" height="720" allow="autoplay"></iframe>{{/html}}
122 +{{html}}<iframe src="https://drive.google.com/file/d/1rvcj_9lGtR069iXlL3Rm1czMNdA3qmGM/preview" width="1920" height="1080" allow="autoplay"></iframe>{{/html}}
126 126  
newxircuits.png
Author
... ... @@ -1,1 +1,0 @@
1 -XWiki.paulapopa
Size
... ... @@ -1,1 +1,0 @@
1 -406.6 KB
Content
side.png
Author
... ... @@ -1,1 +1,0 @@
1 -XWiki.paulapopa
Size
... ... @@ -1,1 +1,0 @@
1 -3.8 KB
Content
Public

TVB Widgets