Attention: The EBRAINS drive will be unavailable for most of the weekend starting the 25th October. Although the Lab is availble while the Drive is down, files that are stored in the Drive will not be loaded and you will be unable to save documents directly on the Lab.


Last modified by paulapopa on 2023/03/24 08:17

From version 58.1
edited by paulapopa
on 2023/03/24 08:17
Change comment: There is no comment for this version
To version 56.1
edited by paulapopa
on 2023/03/23 11:44
Change comment: There is no comment for this version

Summary

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Content
... ... @@ -142,19 +142,18 @@
142 142  
143 143  === 2. Visualize time series resulted from simulations ===
144 144  
145 -This functionality is available for the **StoreResultsToDrive** component. Right click on the **StoreResultsToDrive** and select the **Open Viewer** option:
146 146  
147 147  [[image:view.png]]
148 148  
149 -A new Jupyter tab should open, which contains a read-only Jupyter notebook. After running the cell, you should be able to see the **TimeSeriesBrowser **widget with the //**Collab**// and //**folder**// you have chosen for the **StoreResultsToDrive **component already loaded.
148 +=== ===
150 150  
151 151  [[image:view2.png]]
152 152  
153 -Next, you should choose which time series file to display and click the **View time series button**.
154 154  
153 +
155 155  [[image:view3.png]]
156 156  
157 -== ==
156 +== ==
158 158  
159 159  == Workflow examples ==
160 160  
... ... @@ -165,7 +165,7 @@
165 165  Contains all TVB components necessary for running a TVB simulation (i.e. connectivity, coupling, model, integrator, monitor, simulator).
166 166  
167 167  {{html}}
168 -<iframe width="1280" height="720" src="https://www.youtube.com/embed/bmqPlIJsWLk" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe>
167 +<iframe src="https://drive.google.com/file/d/14sVjWXmtfZB-Zt7i3MA26-MiNWwv3jZI/preview" width="1280" height="720" allow="autoplay"></iframe>
169 169  {{/html}}
170 170  
171 171  
... ... @@ -174,7 +174,7 @@
174 174  Same workflow as before, but the parameter for the model used in simulation are set using the PhasePlaneWidget.
175 175  
176 176  {{html}}
177 -<iframe width="1280" height="720" src="https://www.youtube.com/embed/jhGfYul1z9k" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe>
176 +<iframe src="https://drive.google.com/file/d/1Puoi4-Ej4BhVwtdRzciPD_qNKMF0HvGT/preview" width="1280" height="720" allow="autoplay"></iframe>
178 178  {{/html}}
179 179  
180 180  
... ... @@ -183,13 +183,13 @@
183 183  A simulation workflow where **siibra **is used to retrieve a connectivity from the EBRAINS KG. That connectivity is fed into a TVB Simulator, where the rest of the parameters (coupling, model, etc.) are set to default values.
184 184  
185 185  {{html}}
186 -<iframe width="1280" height="720" src="https://www.youtube.com/embed/hnqTpFGCYMg" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe>
185 +<iframe src="https://drive.google.com/file/d/1bakH6ZD96eMHnYSw1aasF_gNXt8sBS7D/preview" width="1280" height="720" allow="autoplay"></iframe>
187 187  {{/html}}
188 188  
189 189  
190 -=== 4. Run a workflow as an HPB job ===
189 +=== 4. Run a workflow inside an HPB job ===
191 191  
192 192  A workflow simulation which is run remotely, by submitting a job to an HPC site and getting back the results (TimeSeries object).
193 193  
194 -{{html}}<iframe width="1280" height="720" src="https://www.youtube.com/embed/M6rZClFgRrM" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe>{{/html}}
193 +{{html}}<iframe src="https://drive.google.com/file/d/1rvcj_9lGtR069iXlL3Rm1czMNdA3qmGM/preview" width="1280" height="720" allow="autoplay"></iframe>{{/html}}
195 195  
Public

TVB Widgets