Changes for page Widget 3D Head

Last modified by paulapopa on 2025/05/30 15:03

From version 18.1
edited by paulapopa
on 2023/03/01 14:12
Change comment: There is no comment for this version
To version 23.1
edited by paulapopa
on 2023/03/23 13:16
Change comment: There is no comment for this version

Summary

Details

Page properties
Content
... ... @@ -1,7 +1,9 @@
1 1  Source code: [[https:~~/~~/github.com/the-virtual-brain/tvb-widgets>>https://github.com/the-virtual-brain/tvb-widgets]]
2 2  
3 -Immediate testing: [[https:~~/~~/lab.ch.ebrains.eu/hub/user-redirect/lab/tree/shared/TVB%20Widgets/REPO/tvb-widgets/notebooks/HeadWidget.ipynb>>https://lab.ch.ebrains.eu/hub/user-redirect/lab/tree/shared/TVB%20Widgets/REPO/tvb-widgets/notebooks/HeadWidget.ipynb]]
3 +This is part of a Pypi release: [[https:~~/~~/pypi.org/project/tvb-widgets/>>https://pypi.org/project/tvb-widgets/]]
4 4  
5 +//**tvb-widgets**// is also already installed in the official image released for EBRAINS lab, where you can test it directly.
6 +
5 5  == Purpose ==
6 6  
7 7  It is a Jupyter widget intended for visualization of the 3D Head data available for a patient:
... ... @@ -43,7 +43,6 @@
43 43  1. Use a file browser to load the data and automatically display it
44 44  1. Use directly the API to load the data and display it
45 45  
46 -
47 47  For the first option, you have to run the following 2 lines of code in a notebook cell and then just use the UI controls:
48 48  
49 49  (% class="box" %)
... ... @@ -52,7 +52,10 @@
52 52  display(widget)
53 53  )))
54 54  
56 +{{html}}
57 +<iframe width="840" height="480" src="https://www.youtube.com/embed/BCCh-wdcnVo" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe>{{/html}}
55 55  
59 +
56 56  For the second option, the API is described below:
57 57  
58 58  In a new cell, we instantiate the **HeadWidget** and a **FaceSurface** datatype that we want to visualize. Using the //**add_datatype**// method we add the surface to our widget and __display__ the widget:
... ... @@ -70,7 +70,7 @@
70 70  )))
71 71  
72 72  {{html}}
73 -<iframe src="https://drive.google.com/file/d/1Egp9Lk-HGMATc9em6Kw_jSHmybTD2vzM/preview" width="840" height="480" allow="autoplay"></iframe>
77 +<iframe width="840" height="480" src="https://www.youtube.com/embed/8bmjKp3BYFA" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe>
74 74  {{/html}}
75 75  
76 76  Next, we can continue adding other datatypes to this widget, by calling //**add_datatype**// multiple times. A maximum of 10 datatypes are supported by this widget.
... ... @@ -96,7 +96,7 @@
96 96  )))
97 97  
98 98  {{html}}
99 -<iframe src="https://drive.google.com/file/d/1RLwts75Hh31LoPdWLK7QOM61KIsOabF1/preview" width="840" height="480" allow="autoplay"></iframe>
103 +<iframe width="840" height="480" src="https://www.youtube.com/embed/6UQhL9gd1HM" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe>
100 100  {{/html}}
101 101  
102 102  We can also provide a **RegionMapping** to be used as colormap for a surface:
Public

TVB Widgets