Changes for page Widget 3D Head

Last modified by paulapopa on 2025/05/30 15:03

From version 22.1
edited by ldomide
on 2023/03/08 17:28
Change comment: There is no comment for this version
To version 16.2
edited by paulapopa
on 2023/03/01 13:58
Change comment: There is no comment for this version

Summary

Details

Page properties
Author
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1 -XWiki.ldomide
1 +XWiki.paulapopa
Content
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1 1  Source code: [[https:~~/~~/github.com/the-virtual-brain/tvb-widgets>>https://github.com/the-virtual-brain/tvb-widgets]]
2 2  
3 -This is part of a Pypi release: [[https:~~/~~/pypi.org/project/tvb-widgets/>>https://pypi.org/project/tvb-widgets/]]
3 +Immediate testing: [[https:~~/~~/lab.ch.ebrains.eu/hub/user-redirect/lab/tree/shared/TVB%20Widgets/REPO/tvb-widgets/notebooks/HeadWidget.ipynb>>https://lab.ch.ebrains.eu/hub/user-redirect/lab/tree/shared/TVB%20Widgets/REPO/tvb-widgets/notebooks/HeadWidget.ipynb]]
4 4  
5 -//**tvb-widgets**// is also already installed in the official image released for EBRAINS lab, where you can test it directly.
6 -
7 7  == Purpose ==
8 8  
9 9  It is a Jupyter widget intended for visualization of the 3D Head data available for a patient:
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40 40  from IPython.core.display_functions import display
41 41  )))
42 42  
43 -Then, there are 2 options to work with the widget:
41 +Then, we instantiate the **HeadWidget** and a **FaceSurface** datatype that we want to visualize. Using the //**add_datatype**// method we add the surface to our widget and __display__ the widget:
44 44  
45 -1. Use a file browser to load the data and automatically display it
46 -1. Use directly the API to load the data and display it
47 -
48 -For the first option, you have to run the following 2 lines of code in a notebook cell and then just use the UI controls:
49 -
50 50  (% class="box" %)
51 51  (((
52 -widget = api.HeadBrowser()
53 -display(widget)
54 -)))
55 -
56 -{{html}}
57 -<iframe src="https://drive.google.com/file/d/1lY3X5eqJfOLmkmHuBa2iq_Aas8mDPa1e/preview" width="840" height="480" allow="autoplay"></iframe>
58 -{{/html}}
59 -
60 -
61 -For the second option, the API is described below:
62 -
63 -In a new cell, we instantiate the **HeadWidget** and a **FaceSurface** datatype that we want to visualize. Using the //**add_datatype**// method we add the surface to our widget and __display__ the widget:
64 -
65 -(% class="box" %)
66 -(((
67 67  widget = api.HeadWidget()
68 68  
69 69  face = surfaces.FaceSurface().from_file()
Public

TVB Widgets