Changes for page Widget 3D Head

Last modified by paulapopa on 2025/05/30 15:03

From version 23.1
edited by paulapopa
on 2023/03/23 13:16
Change comment: There is no comment for this version
To version 20.1
edited by paulapopa
on 2023/03/01 14:12
Change comment: There is no comment for this version

Summary

Details

Page properties
Content
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1 1  Source code: [[https:~~/~~/github.com/the-virtual-brain/tvb-widgets>>https://github.com/the-virtual-brain/tvb-widgets]]
2 2  
3 -This is part of a Pypi release: [[https:~~/~~/pypi.org/project/tvb-widgets/>>https://pypi.org/project/tvb-widgets/]]
3 +Immediate testing: [[https:~~/~~/lab.ch.ebrains.eu/hub/user-redirect/lab/tree/shared/TVB%20Widgets/REPO/tvb-widgets/notebooks/HeadWidget.ipynb>>https://lab.ch.ebrains.eu/hub/user-redirect/lab/tree/shared/TVB%20Widgets/REPO/tvb-widgets/notebooks/HeadWidget.ipynb]]
4 4  
5 -//**tvb-widgets**// is also already installed in the official image released for EBRAINS lab, where you can test it directly.
6 -
7 7  == Purpose ==
8 8  
9 9  It is a Jupyter widget intended for visualization of the 3D Head data available for a patient:
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45 45  1. Use a file browser to load the data and automatically display it
46 46  1. Use directly the API to load the data and display it
47 47  
46 +
47 +
48 48  For the first option, you have to run the following 2 lines of code in a notebook cell and then just use the UI controls:
49 49  
50 50  (% class="box" %)
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53 53  display(widget)
54 54  )))
55 55  
56 -{{html}}
57 -<iframe width="840" height="480" src="https://www.youtube.com/embed/BCCh-wdcnVo" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe>{{/html}}
58 58  
59 -
60 60  For the second option, the API is described below:
61 61  
62 62  In a new cell, we instantiate the **HeadWidget** and a **FaceSurface** datatype that we want to visualize. Using the //**add_datatype**// method we add the surface to our widget and __display__ the widget:
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74 74  )))
75 75  
76 76  {{html}}
77 -<iframe width="840" height="480" src="https://www.youtube.com/embed/8bmjKp3BYFA" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe>
74 +<iframe src="https://drive.google.com/file/d/1Egp9Lk-HGMATc9em6Kw_jSHmybTD2vzM/preview" width="840" height="480" allow="autoplay"></iframe>
78 78  {{/html}}
79 79  
80 80  Next, we can continue adding other datatypes to this widget, by calling //**add_datatype**// multiple times. A maximum of 10 datatypes are supported by this widget.
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100 100  )))
101 101  
102 102  {{html}}
103 -<iframe width="840" height="480" src="https://www.youtube.com/embed/6UQhL9gd1HM" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe>
100 +<iframe src="https://drive.google.com/file/d/1RLwts75Hh31LoPdWLK7QOM61KIsOabF1/preview" width="840" height="480" allow="autoplay"></iframe>
104 104  {{/html}}
105 105  
106 106  We can also provide a **RegionMapping** to be used as colormap for a surface:
Public

TVB Widgets