Changes for page Widget PhasePlane
Last modified by ldomide on 2023/03/08 17:28
From version 1.4
edited by teodoramisan
on 2023/01/03 12:26
on 2023/01/03 12:26
Change comment:
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To version 1.7
edited by teodoramisan
on 2023/01/03 13:29
on 2023/01/03 13:29
Change comment:
There is no comment for this version
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... ... @@ -39,3 +39,60 @@ 39 39 40 40 * Model (Generic2dOscillator, Epileptor, Hopfield, etc.) 41 41 * Integrator (HeunDeterministic, HeunStochastic, Identity, etc.) 42 + 43 +== Requirements and installation == 44 + 45 +Before installing the tvb-widgets library containing the PhasePlane widget, the following python libraries and Jupyter extensions should be installed: 46 + 47 +* **Libraries:** 48 +** [[ipympl>>https://github.com/matplotlib/ipympl#installation]] 49 +* **Extensions:** 50 + 51 +(% class="box" %) 52 +((( 53 +jupyter labextension install @jupyter-widgets/jupyterlab-manager 54 + 55 +jupyter labextension install jupyter-matplotlib 56 +))) 57 + 58 +Then, to install the tvb-widgets library, just type: 59 + 60 +(% class="box" %) 61 +((( 62 +pip install tvb-widgets 63 +))) 64 + 65 +== API usage == 66 + 67 +First, the correct matplotlib backend must be set, which enables the interaction with the TimeSeries widget, by running the following command: 68 + 69 +(% class="box" %) 70 +((( 71 +%matplotlib widget 72 +))) 73 + 74 +Then, the PhasePlaneWidget (from the tvb-widgets API), the package lab (from tvb simulator) and the display function should be imported: 75 + 76 +(% class="box" %) 77 +((( 78 +{{{from tvbwidgets.api import PhasePlaneWidget 79 +from tvb.simulator.lab import * 80 +}}} 81 + 82 +{{{from IPython.core.display_functions import display}}} 83 +))) 84 + 85 +The widget can be initialized with the required parameters (Model and Integrator) as it shows below: 86 + 87 +(% class="box" %) 88 +((( 89 +{{{w = PhasePlaneWidget(model=models.Generic2dOscillator(), 90 + integrator=integrators.HeunDeterministic())}}} 91 +))) 92 + 93 +Finally, to display and interact with the PhasePlane widget, the **//get_widget//**// //method is used inside the //**display **//function: 94 + 95 +(% class="box" %) 96 +((( 97 +{{{display(w.get_widget(plot_size=(6,7)))}}} 98 +)))