Last modified by richtesn on 2022/05/23 22:36
From version 16.1
edited by richtesn
on 2020/12/16 13:09
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To version 9.1
edited by dariak
on 2020/09/24 11:00
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4 4  (((
5 5  = Molecular Tools: protein association rates and binding sites =
6 6  
7 -This collab contains a set of tools and tutorials for exploring protein binding properties based on their electrostatics and estimation of protein-protein association rates
8 -
9 9  Authors: Stefan Richter
10 10  )))
11 11  )))
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16 16  (((
17 17  = What can I find here? =
18 18  
19 -Please note, the corresponding jupyter notebooks will be transferred from Collaboratory 1. So far they can be found here: 
20 -[[https:~~/~~/collab.humanbrainproject.eu/#/collab/1655/nav/362934>>https://collab.humanbrainproject.eu/#/collab/1655/nav/362934]]
17 +* Notice how the table of contents on the right
18 +* is automatically updated
19 +* to hold this page's headers
21 21  
22 -* (((
23 -Tools and tutorials that describes how to:
24 -
25 -* simulate protein-protein association  using Brownian Dynamics (BD)  simulations (web server webSDA)
26 -* analyse the results of a Brownian dynamics simulation for calculating protein-protein association rate constants
27 -* compute protein electrostatic potential (under development)
28 -* (((
29 -compare the electrostatic potentials surrounding a set of protein  isoforms or specific regions with multipipsa (under development)
30 -)))
31 -* (((
32 -identify potential protein binding sites by comparing the electrostatic potentials of a set of protein isoforms (under development)
33 -)))
34 -)))
35 -
36 36  = Who has access? =
37 37  
38 38  All EBRAINS users