Last modified by richtesn on 2022/05/23 22:36
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5 = Molecular Tools:
6 protein association rates and binding sites =
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8 This collab contains a set of tools and tutorials for exploring protein binding properties based on their electrostatics and estimation of protein-protein association rates
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10 Authors: Neil Bruce, Daria Kokh, Stefan Richter, Rebecca Wade
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18 = What can I find here? =
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20 The descriptions of
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23 Tools and tutorials that describes how to:
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25 * simulate protein-protein association  using Brownian Dynamics (BD)  simulations (web server webSDA)
26 * analyse the results of a Brownian dynamics simulation for calculating protein-protein association rate constants
27 * compute protein electrostatic potential (under development)
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29 compare the electrostatic potentials surrounding a set of protein  isoforms or specific regions with multipipsa (under development)
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32 identify potential protein binding sites by comparing the electrostatic potentials of a set of protein isoforms (under development)
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36 = Who has access? =
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38 All EBRAINS users
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44 {{box title="**Contents**"}}
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