Changes for page Molecular Tools: protein association rates and binding sites
Last modified by richtesn on 2022/05/23 22:36
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... ... @@ -4,8 +4,6 @@ 4 4 ((( 5 5 = Molecular Tools: protein association rates and binding sites = 6 6 7 -This collab contains a set of tools and tutorials for exploring protein binding properties based on their electrostatics and estimation of protein-protein association rates 8 - 9 9 Authors: Stefan Richter 10 10 ))) 11 11 ))) ... ... @@ -16,28 +16,10 @@ 16 16 ((( 17 17 = What can I find here? = 18 18 19 -Please note, the corresponding usecases as jupyter notebooks will be transferred from Collaboratory 1. So far they can be found here: 20 -[[https:~~/~~/collab.humanbrainproject.eu/#/collab/1655/nav/362934>>https://collab.humanbrainproject.eu/#/collab/1655/nav/362934]] 17 +* Notice how the table of contents on the right 18 +* is automatically updated 19 +* to hold this page's headers 21 21 22 -The corresponding guidebooks can be found here: 23 -[[https:~~/~~/collab.humanbrainproject.eu/#/collab/1655/nav/18580>>https://collab.humanbrainproject.eu/#/collab/1655/nav/18580]] 24 - 25 -The descriptions of 26 - 27 -* ((( 28 -Tools and tutorials that describes how to: 29 - 30 -* simulate protein-protein association using Brownian Dynamics (BD) simulations (web server webSDA) 31 -* analyse the results of a Brownian dynamics simulation for calculating protein-protein association rate constants 32 -* compute protein electrostatic potential (under development) 33 -* ((( 34 -compare the electrostatic potentials surrounding a set of protein isoforms or specific regions with multipipsa (under development) 35 -))) 36 -* ((( 37 -identify potential protein binding sites by comparing the electrostatic potentials of a set of protein isoforms (under development) 38 -))) 39 -))) 40 - 41 41 = Who has access? = 42 42 43 43 All EBRAINS users
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