Changes for page 1. Setting up the working environment
Last modified by puchades on 2025/02/13 10:43
Summary
-
Page properties (1 modified, 0 added, 0 removed)
-
Attachments (0 modified, 1 added, 0 removed)
Details
- Page properties
-
- Content
-
... ... @@ -39,10 +39,12 @@ 39 39 40 40 Click on the "View Brain" button in order to preview your images. 41 41 42 +Now go to the WebAlign app in order to start the registration to atlas. 43 + 42 42 [[image:Screenshot create_brain app.png]] 43 43 44 44 45 -=== Use Image service app === 47 +=== Use Image service app (alt.) === 46 46 47 47 **2b. Start the Image service UI from your webapp** 48 48 ... ... @@ -97,13 +97,13 @@ 97 97 98 98 === Opening a sample dataset === 99 99 100 -Demo dataset is loaded using the file: **demo_mouse_data_start** 102 +Demo dataset is loaded using the file: **demo_mouse_data_start.waln** 101 101 102 -You can see the result of a finished anchoring by choosing the file: **demo_mouse_data** 104 +You can see the result of a finished anchoring by choosing the file: **demo_mouse_data.waln** 103 103 104 104 === Opening a private dataset === 105 105 106 -After you have uploaded your images to the bucket and ingested your images with the Image service, this has generated DZI chunks. These DZI files are used by WebAlign.108 +After you have uploaded your images to the bucket and ingested your images with the QUINT Image creator app, this has generated DZIP chunks. These DZIP files are used by WebAlign. 107 107 108 108 ~1. Start a new registration by pressing "create new series", the UI will ask you for the name of the collab where DZI chunks are stored. E.g. my-collab-name 109 109
- create series webAlign.png
-
- Author
-
... ... @@ -1,0 +1,1 @@ 1 +XWiki.puchades - Size
-
... ... @@ -1,0 +1,1 @@ 1 +20.4 KB - Content