Last modified by puchades on 2025/02/13 10:43
From version 23.1
edited by puchades
on 2023/06/21 10:56
Change comment: There is no comment for this version
To version 27.1
edited by puchades
on 2023/06/21 11:13
Change comment: There is no comment for this version

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39 39  
40 40  Click on the "View Brain" button in order to preview your images.
41 41  
42 +Now go to the WebAlign app in order to start the registration to atlas.
43 +
42 42  [[image:Screenshot create_brain app.png]]
43 43  
44 44  
45 -=== Use Image service app ===
47 +=== Use Image service app (alt.) ===
46 46  
47 47  **2b. Start the Image service UI from your webapp**
48 48  
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97 97  
98 98  === Opening a sample dataset ===
99 99  
100 -Demo dataset is loaded using the file: **demo_mouse_data_start**
102 +Demo dataset is loaded using the file: **demo_mouse_data_start.waln**
101 101  
102 -You can see the result of a finished anchoring by choosing the file: **demo_mouse_data**
104 +You can see the result of a finished anchoring by choosing the file: **demo_mouse_data.waln**
103 103  
104 104  === Opening a private dataset ===
105 105  
106 -After you have uploaded your images to the bucket and ingested your images with the Image service, this has generated DZI chunks. These DZI files are used by WebAlign.
108 +After you have uploaded your images to the bucket and ingested your images with the QUINT Image creator app, this has generated DZIP chunks. These DZIP files are used by WebAlign.
107 107  
108 108  ~1. Start a new registration by pressing "create new series", the UI will ask you for the name of the collab where DZI chunks are stored. E.g. my-collab-name
109 109  
110 -2. WebAlign will search for DZI files and list those found.
112 +2. WebAlign will search for DZIP files and list those found.
111 111  
112 112  3. Enter a name for the descriptor json file which will be created and will contain your anchoring information.
113 113  
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115 115  
116 116  5. Press //"create"//. The main window will now display WebAlign. This step can take some time.
117 117  
120 +[[image:create series webAlign.png]]
121 +
122 +
118 118  === Registration instructions ===
119 119  
120 120  **Short keys**
create series webAlign.png
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1 +XWiki.puchades
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