Last modified by puchades on 2025/02/13 10:43
From version 24.1
edited by puchades
on 2023/06/21 10:58
Change comment: There is no comment for this version
To version 21.1
edited by puchades
on 2023/06/21 10:55
Change comment: Uploaded new attachment "create collab.png", version {1}

Summary

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... ... @@ -29,7 +29,7 @@
29 29  
30 30  === Use the "QUINT image creator" app ===
31 31  
32 -**2a. Select images to ingest**
32 +**~1. Select images to ingest**
33 33  
34 34  Click on your images in order to select them and press the "create brain from selection" button. Choose a name for your serie.
35 35  
... ... @@ -39,16 +39,14 @@
39 39  
40 40  Click on the "View Brain" button in order to preview your images.
41 41  
42 -Now go to the WebAlign app in order to start the registration to atlas.
43 -
44 44  [[image:Screenshot create_brain app.png]]
45 45  
46 46  
47 -=== Use Image service app (alt.) ===
45 +=== Use Image service app ===
48 48  
49 -**2b. Start the Image service UI from your webapp**
47 +**~1. Start the Image service UI from your webapp**
50 50  
51 -* ** Fill in the requested information:**
49 +**2. Fill in the requested information:**
52 52  
53 53   - type or paste the URL of the dataset folder containing the images. //Note!// the name of the collab supports only hyphens.
54 54  
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62 62  
63 63   - allow the image service to access your bucket
64 64  
65 -[[[[image:Skjermbilde 2022-02-08 103443.png||height="199" width="500"]]>>attach:Skjermbilde 2022-02-08 103443.png]]
63 +[[image:Skjermbilde 2022-02-08 103443.png||height="199" width="500"]]
66 66  
67 67  - Store your results: Choose "create a new collab" where your ingested chunks will be stored in the bucket. This option is preferred in order not to overload the Bucket of your current  collab. Give a name to your Bucket as well as a name for the  collab (bucket slug) (see this illustration for more info)
68 68  
69 -[[image:create collab.png]]
67 +[[image:create collab.png||height="427" width="900"]]
70 70  
71 71  - Customize your ingestion:
72 72  
73 73   - give a name to your ingestion in the "description of ingestion" field.
74 74  
75 -* ** For obtaining chunks in DZI format  (compatible with WebAlign),** choose "2D" and "not stack of Images".
76 -* ** Click //"preview"// in order to preview your task**
77 -* ** Click //"create task"//  to launch your ingestion**
78 -* ** Checking results in the Main UI page**
73 +**3. For obtaining chunks in DZI format  (compatible with WebAlign),** choose "2D" and "not stack of Images".
79 79  
75 +**4. Click //"preview"// in order to preview your task**
76 +
77 +**5. Click //"create task"//  to launch your ingestion**
78 +
79 +**6. Checking results in the Main UI page**
80 +
80 80  Press "Task" in the higher right corner of the window.
81 81  
82 82  When creating the task, a red banner is displayed in the "Create Task" view if something goes wrong for instance.