Last modified by puchades on 2025/02/13 10:43
From version 40.1
edited by puchades
on 2023/06/22 09:45
Change comment: There is no comment for this version
To version 42.1
edited by puchades
on 2023/06/22 10:06
Change comment: There is no comment for this version

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229 229  
230 230  If you would like to work with an EBRAINS dataset, open the LocaliZoom link from the KG dataset card ( [[https:~~/~~/search.kg.ebrains.eu>>url:https://search.kg.ebrains.eu]]) and paste it in the "Import LocaliZoom link" tab in WebAlign. Save this series as a .waln file you then can open in WebWarp.
231 231  
232 -
233 233  === Non-linear registration ===
234 234  
235 235  1. Navigate to the WebWarp app in the left-hand panel: all the .waln files located in the Bucket are displayed on the WebWarp main page.
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265 265  
266 266   A demo dataset is loaded using the file: demo_mouse_data_lz
267 267  
267 +=== Opening a private or EBRAINS dataset ===
268 268  
269 +LocaliZoom will open all WebAlign (.waln) or WebWarp (.wwrp) files.
269 269  
270 -
271 +=== Create annotation points ===
271 271  
273 +To extract a coordinate, the mouse marker must be positioned at the desired location, and press the space bar. A cross will appear in the selected colour (under Settings), representing the location of the extracted coordinate. After all desired points have been marked, the coordinates can be exported either to Excel.
274 +
275 +Press "delete" in order to remove an annotation.
276 +
277 +Save your annotations with the "save" or "save as" buttons. The file format is .lz
278 +
279 +=== Export of coordinate points ===
280 +
281 +The created points can be exported to an Excel book by pressing "XLSX export".
282 +
283 +The saved .lz file can also be visualised in the 3D viewer, MehView.
284 +
272 272  == **How to use MeshView** ==
273 273  
274 274