Changes for page 1. Setting up the working environment
Last modified by puchades on 2025/02/13 10:43
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... ... @@ -270,38 +270,15 @@ 270 270 271 271 === Create annotation points === 272 272 273 -To extract a coordinate, the mouse marker must be positioned at the desired location, and press the space bar. A cross will appear in the selected colour (under Settings), representing the location of the extracted coordinate. After all desired points have been marked, the coordinates can be exported either to Excel.273 +To extract a coordinate, the mouse marker must be positioned at the desired location, and press the space bar. **A cross will appear in the selected colour** (under settings), representing the location of the extracted coordinate. After all desired points have been marked, **the coordinates can be exported** either to **Excel** (XLSX export). 274 274 275 -Press "delete"in order to remove an annotation.275 +Press delete in order to remove an annotation. 276 276 277 -Save your annotations with the "save" or "save as" buttons. The file format is .lz 278 - 279 279 === Export of coordinate points === 280 280 281 - The createdpointscan beexported toanExcelbook bypressing"XLSX export".279 +or to **MeshView** (11) using the corresponding buttons in the upper toolbar. 282 282 283 -The saved .lz file can also be visualised in the 3D viewer, MeshView. 284 - 285 285 == **How to use MeshView** == 286 286 287 -MeshView is a web application for real-time 3D display of surface mesh data representing structural parcellations from volumetric atlases, and point clouds extracted from datasets. 288 288 289 -Online manual: [[https:~~/~~/meshview-for-brain-atlases.readthedocs.io/en/latest>>https://meshview-for-brain-atlases.readthedocs.io/en/latest]] 290 - 291 -The view can be magnified using the 4-arrow "X" symbol in the top-right corner. 292 - 293 -=== Open point cloud files === 294 - 295 -MeshView can open annotations from LocaliZoom (.lz files). Possibility of a global control of all structures, using the slider will render the meshes transparent or disappear. 296 - 297 -The Individual control allow each structure to be made transparent or disappear. The color for each structure can be changed when clicking on the colored square. 298 - 299 -Navigation in the hierarchy is possible by clicking on the region names (grey boxes), this will collapse parts of the region tree. 300 - 301 -=== Export images === 302 - 303 -The "screenshot" button allows to capture the main window view as a png file. 304 - 305 -[[image:image19.png]] 306 - 307 307
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