Last modified by puchades on 2025/02/13 10:43
From version 53.1
edited by puchades
on 2023/07/05 09:25
Change comment: There is no comment for this version
To version 46.1
edited by puchades
on 2023/06/22 13:23
Change comment: There is no comment for this version

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2 2  
3 3  1. [[Register>>url:https://ebrains.eu/register/]] for an EBRAINS account, login, and set up a [[private collab>>url:https://wiki.ebrains.eu/bin/view/Collabs/]].
4 4  1. Initialise the Bucket by clicking on Bucket in the navigation panel -> Create Bucket.
5 -1. Remember to set your data proxy bucket to "public". Your collab can still be private.
6 6  1. Give users Admin, Editor or Viewer rights by clicking** Team** in the navigation panel.
7 -1. Install WebAlign, WebWarp, LocaliZoom, and Meshview from the EBRAINS Collaboratory App Store (see instructions below)[[image:public_data_proxy_bucket.png]]
6 +1. Install WebAlign, WebWarp, LocaliZoom, and Meshview from the EBRAINS Collaboratory App Store (see instructions below)
8 8  
9 9  == How to install Collaboratory Apps ==
10 10  
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30 30  
31 31  === Use the "QUINT image creator" app ===
32 32  
33 -(% style="color:#e67e22" %)NB! we are still working on this app for the moment. For the enabling viewer links,  make your bucket "public". The collab can still be "private".
34 -
35 35  **2a. Select images to ingest**
36 36  
37 37  Click on your images in order to select them and press the "create brain from selection" button. Choose a name for your serie.
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295 295  
296 296  === Open point cloud files ===
297 297  
298 -MeshView can open annotations from LocaliZoom (.lz files). Possibility of a global control of all structures, using the slider will render the meshes transparent or disappear.
295 +MeshView can open annotations from LocaliZoom (.lz files).
299 299  
300 -The individual control allow each structure to be made transparent or disappear. The color for each structure can be changed when clicking on the colored square.
301 -
302 -Navigation in the hierarchy is possible by clicking on the region names (grey boxes), this will collapse parts of the region tree.
303 -
304 -=== Export images ===
305 -
306 -The "screenshot" button allows to capture the main window view as a png file.
307 -
308 308  [[image:image19.png]]
309 -
310 -
public_data_proxy_bucket.png
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1 -XWiki.puchades
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1 -14.4 KB
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