Changes for page 4. Image segmentation with ilastik
Last modified by annedevismes on 2021/06/08 11:56
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... ... @@ -5,12 +5,16 @@ 5 5 1. Pixel classification only (with two or more classes) 6 6 1. Pixel classification with two classes (//immunoreactivity// and //background//), followed by object classification with two classes (//objects-of-interest// and //artefact//). 7 7 8 - === H3 HeadingsWillAppearIn TheTableofContent===8 +**Which approach is best for my dataset?** 9 9 10 - ====You can also add images====10 +As a general rule, pixel classification is suitable for images in which there are clear differences in the colour, intensity and/ or texture of the feature-of-interest versus the background and other structures. If there is non-specific labelling in the image that is very similar in appearance to the labelling-of-interest, object classification may allow the non-specific labelling to be filtered out based on object level features such as size and shape. The best approach is determined by trial and error. 11 11 12 - [[image:Collaboratory.Apps.Article.Code.ArticleSheet@placeholder.jpg]]12 +=== Pixel classification workflow === 13 13 14 + 15 +==== ==== 16 + 17 + 14 14 Photo by David Clode 15 15 16 16 ==== Or code ====