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4. Image segmentation with ilastik

Version 1.4 by puchades on 2020/03/25 14:41

Analysis approach for series of rodent brain section image

There are two main approaches for the analysis of rodent brain section images.

  1. Pixel classification only (with two or more classes)
  2. Pixel classification with two classes (immunoreactivity and background), followed by object classification with two classes (objects-of-interest and artefact).

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Photo by David Clode

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