Attention: The EBRAINS drive will be unavailable for most of the weekend starting the 25th October. Although the Lab is availble while the Drive is down, files that are stored in the Drive will not be loaded and you will be unable to save documents directly on the Lab.


4. Image segmentation with ilastik

Version 1.3 by puchades on 2020/03/25 14:37

Analysis approach for series of rodent brain section image

There are two main approaches for the analysis of rodent brain section images.

  1. Pixel classification only (with two or more classes)
  2. Pixel classification with two classes (immunoreactivity and background), followed by object classification with two classes (objects-of-interest and artefact).

H3 Headings Will Appear In The Table of Content

You can also add images

placeholder.jpg

Photo by David Clode

Or code

Code blocks can be added by using the code macro:

x = 1
if x == 1:
   # indented four spaces
   print("x is 1.")