Wiki source code of TVB C -- High-speed parallel brain network models
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| 5 | = TVB C ~-~- High-speed parallel brain network models = | ||
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| 7 | A fast implementation of The Virtual Brain brain network simulator | ||
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| 9 | [[image:4144.jpeg]] | ||
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| 17 | == What can I find here? == | ||
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| 19 | * an IPython notebook that describes how to | ||
| 20 | ** pull the TVB-C container into one of the associated supercomputers using PyUnicore | ||
| 21 | ** upload model data to the supercomputer | ||
| 22 | ** set up and run simulations | ||
| 23 | ** download simulation results | ||
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| 25 | == How do I use it? == | ||
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| 27 | * the simulation code is implemented as a Docker container | ||
| 28 | * the container is executed on supercomputers and operated via IPython notebooks | ||
| 29 | * Find the notebook by clicking on "Drive" in the left menu. The notebook is called "TVB_C.ipynb" | ||
| 30 | * To use the notebook, download it onto your local filesystem, create a new Collab and upload it there. | ||
| 31 | * Then, head over to [[https:~~/~~/lab.ebrains.eu/>>url:https://lab.ebrains.eu/]] to edit and run your notebook. | ||
| 32 | * Depending on whether you created a public or a private notebook it will be accessible in either "drive/Shared with all" or "drive/Shared with groups'" | ||
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| 34 | == Partners == | ||
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| 36 | * Charité Universitätsmedizin Berlin | ||
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| 38 | == Developer == | ||
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| 40 | * Michael Schirner (michael.schirner@charite.de) | ||
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| 48 | {{box title="**Contents**"}} | ||
| 49 | {{toc/}} | ||
| 50 | {{/box}} | ||
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