TVB C -- High-speed parallel brain network models

Version 18.1 by michaels on 2020/05/06 15:07

A fast implementation of The Virtual Brain brain network simulator

What can I find here?

an IPython notebook that describes how to
- pull the TVB-C container into one of the associated supercomputers using PyUnicore
- upload model data to the supercomputer
- set up and run simulations
- download simulation results

the simulation code is implemented as a Docker container
the container is executed on supercomputers and operated via IPython notebooks
Find the notebook by clicking on "Drive" in the left menu. The notebook is called "TVB_C.ipynb"
To use the notebook, download it onto your local filesystem, create a new Collab and upload it there.
Then, head over to https://lab.ebrains.eu/ to edit and run your notebook.
Depending on whether you created a public or a private notebook it will be accessible in either "drive/Shared with all" or "drive/Shared with groups'"

Partners	Charité Universitätsmedizin Berlin CHARITE
Maintainers	Petra Ritter Michael Schirner Paul Triebkorn
Contributors	Petra Ritter Michael Schirner Paul Triebkorn
Homepage	https://www.brainsimulation.org
Documentation	https://drive.google.com/file/d/1VcXf3GX3KoihF4UzJQXzuGL4XWoqj5Jr/view
Support	petra.ritter@charite.de
Source Code	https://hub.docker.com/r/thevirtualbrain/tvb_converter
Download Page	https://hub.docker.com/r/thevirtualbrain/tvb_converter
License	GPLv3
Current Version	1.0
All Versions	1.0

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