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Last modified by dionperd on 2024/04/08 12:54
From version 14.1
edited by dionperd
on 2021/06/02 16:32
Change comment: Uploaded new attachment "HandsOn.zip", version 1.1
To version 15.1
edited by dionperd
on 2021/06/02 16:33
Change comment: There is no comment for this version

Summary

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8 8  
9 9  1. Run the TVB-NEST app by browsing to [[https:~~/~~/tvb-nest.apps.hbp.eu/>>url:https://tvb-nest.apps.hbp.eu/]] and logging in with your EBRAINS account.
10 10  1. Navigate to "ContributedNotebooks" folder, which offers persistent storage for EBRAINS users.
11 -1. You will need the notebook [[BasalGanglia.ipynb>>https://drive.ebrains.eu/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/file/5thTVBinEBRAINSworkshop/BasalGanglia.ipynb]], the data folder [[basal_ganglia_conn>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/5thTVBinEBRAINSworkshop/basal_ganglia_conn]], and the pictures folder [[pics>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/5thTVBinEBRAINSworkshop/pics]], found in the [[drive folder "5thTVBinEBRAINSworkshop>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/5thTVBinEBRAINSworkshop]]. All materials can also be found as a .zip file "HandsOn.zip" attached to the current page (scroll down to find it).
11 +1. You will need the notebook [[BasalGanglia.ipynb>>https://drive.ebrains.eu/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/file/5thTVBinEBRAINSworkshop/BasalGanglia.ipynb]], the data folder [[basal_ganglia_conn>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/5thTVBinEBRAINSworkshop/basal_ganglia_conn]], and the pictures folder [[pics>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/5thTVBinEBRAINSworkshop/pics]], found in the [[drive folder "5thTVBinEBRAINSworkshop>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/5thTVBinEBRAINSworkshop]]. All materials can also be found as a .zip file "[[HandsOn.zip>>https://wiki.ebrains.eu/bin/download/Collabs/tvb-multiscale-cosim-mcgillsummerschool/4th%20TVB%20in%20EBRAINS%20TVB-multiscale%20cosimulation%20hands-on%20session/WebHome/HandsOn.zip?rev=1.1]]" attached to the current page (scroll down to find it).
12 12  1. The easiest way to get the above materials is to upload "HandsOn.zip" to "ContributedNotebooks" folder, and run the command
13 -! unzip ./Homework.zip
13 +! unzip ./HandsOn.zip
14 14  on a cell of a new notebook, from within the same folder.
15 15  1. Finally, navigate inside the decompressed HandsOn folder and run the notebook BasalGanglia.ipynb. Your results will be saved in your personal drive space and can be found in the "ContributedNotebooks" folder whenever you log in again to the app.
16 16