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Last modified by dionperd on 2024/04/08 12:55
From version 29.1
edited by dionperd
on 2021/05/28 17:41
Change comment: There is no comment for this version
To version 25.1
edited by dionperd
on 2021/05/27 19:17
Change comment: There is no comment for this version

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14 14  (((
15 15  = What can I find here? =
16 16  
17 -* [[Homework materials>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Homework]] including a use case of a TVB - Spiking Basal Ganglia multiscale cosimulation (see also attached .zip file below)
18 -* [[Homework solutions>>https://drive.ebrains.eu/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/file/HomeworkSolutions.zip]] (see also attached .zip file below; password protected)
17 +* Use case of a TVB - Spiking Basal Ganglia cosimulation
18 +* Homework materials
19 19  
20 20  = Who has access? =
21 21  
... ... @@ -25,12 +25,8 @@
25 25  = Guide to run the use-case notebook =
26 26  
27 27  1. Run the TVB-NEST app by browsing to [[https:~~/~~/tvb-nest.apps.hbp.eu/>>https://tvb-nest.apps.hbp.eu/||target="_top"]] and logging in with your EBRAINS account.
28 -1. Navigate to "ContributedNotebooks" folder, which offers persistent storage for EBRAINS users.
29 -1. You will need the notebook [[BasalGangliaHomework.ipynb>>https://drive.ebrains.eu/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/file/Homework/BasalGangliaHomework.ipynb]], the data folder [[basal_ganglia_conn>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Homework/basal_ganglia_conn]], and the pictures folder [[pics>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Homework/pics]], found in the [[drive folder "Homework>>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Homework]]. All materials can also be found as a .zip file "Homework.zip" attached to this page (scroll down to find it).
30 -1. The easiest way to get the above materials is to upload "Homework.zip" to "ContributedNotebooks" folder, and run the command
31 -! unzip ./Homework.zip
32 -on a cell of a new notebook, from within the same folder.
33 -1. Finally, navigate inside the decompressed Homework folder and run the notebook BasalGangliaHomework.ipynb. Your results will be saved in your personal drive space and can be found in the "ContributedNotebooks" folder whenever you log in again to the app.
28 +1. Navigate to "ContributedNotebooks" folder and upload the notebook "BasalGangliaHomework.ipynb" and the data folder "basal_ganglia_conn". Both can be found either in the [[drive folder "Homework">>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Homework]], or in .zip file "Homework.zip" attached to this page (scroll down to find it).
29 +1. Now you can run the notebook in the TVB-NEST app. Your results will be saved in your personal drive space and can be found in the "ContributedNotebooks" folder whenever you log in again to the app.
34 34  )))
35 35  
36 36