Course on TVB-multiscale cosimulation
McGill University "Summer School in Nonlinear Dynamics for the Life Sciences with Applications to Neuroscience and Psychology" (June 2021)
What can I find here?
- Use case of a TVB - Spiking Basal Ganglia cosimulation
- Homework materials
Who has access?
Everybody with an EBRAINS account.
Guide to run the use-case notebook
- Run the TVB-NEST app by browsing to https://tvb-nest.apps.hbp.eu/ and logging in with your EBRAINS account.
- Navigate to "ContributedNotebooks" folder and upload the notebook "BasalGangliaHomework.ipynb" and the data folder "basal_ganglia_conn". Both can be found either in the drive folder "Homework", or in .zip file "Homework.zip" attached to this page (scroll down to find it).
- Now you can run the notebook in the TVB-NEST app. Your results will be saved in your personal drive space and can be found in the "ContributedNotebooks" folder whenever you log in again to the app.