Attention: The Keycloak upgrade has been completed. As this was a major upgrade, there may be some unexpected issues occurring. Please report any issues you find to support by using the contact form found at https://www.ebrains.eu/contact/. Thank you for your patience and understanding. 


Last modified by dionperd on 2024/04/08 12:55

From version 3.1
edited by dionperd
on 2021/05/17 09:54
Change comment: There is no comment for this version
To version 25.1
edited by dionperd
on 2021/05/27 19:17
Change comment: There is no comment for this version

Summary

Details

Page properties
Content
... ... @@ -2,9 +2,9 @@
2 2  (((
3 3  (% class="container" %)
4 4  (((
5 -= My Collab's Extended Title =
5 += Course on TVB-multiscale cosimulation =
6 6  
7 -My collab's subtitle
7 +McGill University "Summer School in Nonlinear Dynamics for the Life Sciences with Applications to Neuroscience and Psychology" (June 2021)
8 8  )))
9 9  )))
10 10  
... ... @@ -14,13 +14,19 @@
14 14  (((
15 15  = What can I find here? =
16 16  
17 -* Notice how the table of contents on the right
18 -* is automatically updated
19 -* to hold this page's headers
17 +* Use case of a TVB - Spiking Basal Ganglia cosimulation
18 +* Homework materials
20 20  
21 21  = Who has access? =
22 22  
23 -Describe the audience of this collab.
22 +Everybody with an EBRAINS account.
23 +
24 +
25 += Guide to run the use-case notebook =
26 +
27 +1. Run the TVB-NEST app by browsing to [[https:~~/~~/tvb-nest.apps.hbp.eu/>>https://tvb-nest.apps.hbp.eu/||target="_top"]] and logging in with your EBRAINS account.
28 +1. Navigate to "ContributedNotebooks" folder and upload the notebook "BasalGangliaHomework.ipynb" and the data folder "basal_ganglia_conn". Both can be found either in the [[drive folder "Homework">>https://drive.ebrains.eu/#my-libs/lib/14db5dbf-97c8-4971-86e5-9b15fd57dd87/Homework]], or in .zip file "Homework.zip" attached to this page (scroll down to find it).
29 +1. Now you can run the notebook in the TVB-NEST app. Your results will be saved in your personal drive space and can be found in the "ContributedNotebooks" folder whenever you log in again to the app.
24 24  )))
25 25  
26 26  
Homework.zip
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.dionperd
Size
... ... @@ -1,0 +1,1 @@
1 +11.2 MB
Content
HomeworkSolutions.zip
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.dionperd
Size
... ... @@ -1,0 +1,1 @@
1 +4.2 MB
Content
XWiki.XWikiRights[2]
Allow/Deny
... ... @@ -1,0 +1,1 @@
1 +Allow
Groups
... ... @@ -1,0 +1,1 @@
1 +Collabs.tvb-multiscale-cosim-mcgillsummerschool._.groups.collab-tvb-multiscale-cosim-mcgillsummerschool-administrator
Levels
... ... @@ -1,0 +1,1 @@
1 +view,comment,edit,delete
XWiki.XWikiRights[3]
Allow/Deny
... ... @@ -1,0 +1,1 @@
1 +Allow
Levels
... ... @@ -1,0 +1,1 @@
1 +view
Users
... ... @@ -1,0 +1,1 @@
1 +XWiki.XWikiGuest
XWiki.XWikiRights[4]
Allow/Deny
... ... @@ -1,0 +1,1 @@
1 +Allow
Groups
... ... @@ -1,0 +1,1 @@
1 +XWiki.XWikiAllGroup
Levels
... ... @@ -1,0 +1,1 @@
1 +view