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Version 27.1 by dionperd on 2024/04/08 12:51

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3 [[image:https://www.brainsimulation.org/bsw/img/9812/text_illustration_maxi@2x||alt="INCF assembly 2022 banner"]]
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7 (% style="color:#000000; font-family:Arial; font-size:11pt; font-style:normal; font-variant:normal; font-weight:700; text-decoration:none; white-space:pre-wrap" %)**Title: Enabling multilevel data integration: Turning data to knowledge**
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10 (% style="color:#000000; font-family:Arial; font-size:11pt; font-style:normal; font-variant:normal; font-weight:700; text-decoration:none; white-space:pre-wrap" %)**Chair: Hosted by NFDI-Neuro **
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13 (% style="color:#000000; font-family:Arial; font-size:11pt; font-style:normal; font-variant:normal; font-weight:700; text-decoration:none; white-space:pre-wrap" %)**Date: Sept-15, 2022**
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16 (% style="color:#000000; font-family:Arial; font-size:11pt; font-style:normal; font-variant:normal; font-weight:700; text-decoration:none; white-space:pre-wrap" %)**Location: Online**
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19 (% style="color:#000000; font-family:Arial; font-size:11pt; font-style:normal; font-variant:normal; font-weight:700; text-decoration:none; white-space:pre-wrap" %)**Link: **(%%)[[(% style="font-size:12pt; font-variant:normal; white-space:pre-wrap" %)__https:~~/~~/neuroinformatics.incf.org/2022/program__>>url:https://neuroinformatics.incf.org/2022/program||style="text-decoration:none"]]
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22 == (% style="color:#e74c3c" %)**TVB-multiscale JupyterHub apps are now deprecated! See:**(%%) **[[https:~~/~~/wiki.ebrains.eu/bin/view/Collabs/the-virtual-brain-multiscale/>>url:https://wiki.ebrains.eu/bin/view/Collabs/the-virtual-brain-multiscale/]] (% style="color:#e74c3c" %)about how to run TVB-multiscale (TVB-NEST, TVB-NetPyNE (NEURON), TVB-ANNarchy) on EBRAINS!(%%)** ==
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25 === What can I find here? ===
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27 [[Presentation slides>>attach:2022-09-15_TVB-multiscale_INCF.pdf]] and [[hands-on materials>>attach:WilsonCowan.ipynb]] for the sessions:
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29 * 14:40 - 15:15 (CEST): Multi-scale co-simulation of a brain model by Dionysios Perdikis (Charité)
30 * 15:15 - 16:00 (CEST): Hands-on: Setup a multiscale co-simulation and tune the interface between scales by Dionysios Perdikis (Charité)
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32 === Guide to run the use-case notebook ===
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34 1. Run the EBRAINS TVB-Multiscale app by browsing to [[https:~~/~~/tvb-multiscale.apps.hbp.eu/>>https://tvb-multiscale.apps.hbp.eu/]] and logging in with your EBRAINS account. (The first time you log-in, you might need to try several times by refreshing the page, until it works for you!)
35 1. Navigate to "TVB-Multiscale-Examples/documented_example_notebooks" folder, and upload the [[WilsonCowan.ipynb notebook>>attach:WilsonCowan.ipynb]], to the "Contributed-Notebooks" folder, which offers user-specific persistent storage.
36 1. Run the WilsonCowan.ipynb notebook.
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