Version 13.1 by michaels on 2020/05/06 13:48
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michaels 7.1 5 = TVB C ~-~- High-speed parallel brain network models =
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michaels 7.1 7 A fast implementation of The Virtual Brain brain network simulator
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michaels 13.1 17 == What can I find here? ==
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michaels 7.1 19 * an IPython notebook that describes how to
20 ** pull the TVB-C container into one of the associated supercomputers using PyUnicore
21 ** upload model data to the supercomputer
22 ** set up and run simulations
23 ** download simulation results
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25 == How do I use it? ==
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27 * the simulation code is implemented as a Docker container
28 * the container is executed on supercomputers and operated via IPython notebooks
29 * Find the notebook by clicking on "Drive" in the left menu. The notebook is called "TVB_C.ipynb"
30 * To use the notebook, download it onto your local filesystem, create a new Collab and upload it there.
31 * Then, head over to [[https:~~/~~/lab.ebrains.eu/>>url:https://lab.ebrains.eu/]] to edit and run your notebook.
32 * Depending on whether you created a public or a private notebook it will be accessible in either "drive/Shared with all" or "drive/Shared with groups'"
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34 == Partners ==
35
36 * Charité Universitätsmedizin Berlin
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38 == Developer ==
39
40 * Michael Schirner (michael.schirner@charite.de)
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48 {{box title="**Contents**"}}
49 {{toc/}}
50 {{/box}}
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